Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
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Literature
Metazoan Compara
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- Gene gain/loss tree
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Pan-taxonomic Compara
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- GO: Biological process
- GO: Molecular function
- GO: Cellular component
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Genetic Variation
- Variant table
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DB built by FlyBase

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Gene: CG33203 FBgn0053203

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Gene Synonyms

Location

Primary_assembly 3R: 28,870,606-28,887,709 reverse strand.

BDGP6.32:AE014297.3

About this gene

This gene has 3 transcripts (splice variants), 107 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG33203-RF	FBtr0330302	3243	500aa	FBpp0303334	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B7Z0R3	NM_001144647 NM_001144647.3 NP_001138119 NP_001138119.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
CG33203-RE	FBtr0301017	3243	453aa	FBpp0290239	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8MYY1 Q9VAS3	NM_001170294 NM_001170294.2 NP_001163765 NP_001163765.1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
CG33203-RD	FBtr0301016	3228	450aa	FBpp0290238	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q86D34	NM_001170293 NM_001170293.2 NP_001163764 NP_001163764.1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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Gene-based displays