Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
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- Orthologues
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Genetic Variation
- Variant table
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- Structural variants
Gene expression
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DB built by FlyBase

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Gene: CG33299 FBgn0053299

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Gene Synonyms

Location

Primary_assembly 2L: 9,656,600-9,657,424 forward strand.

BDGP6.32:AE014134.6

About this gene

This gene has 2 transcripts (splice variants), 47 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG33299-RB	FBtr0300213	825	193aa	FBpp0289450	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7KTG1	NM_205949 NM_205949.4 NP_995671 NP_995671.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
CG33299-RC	FBtr0303875	762	172aa	FBpp0292878	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F2FBB7 M9MSH6	NM_001201831 NM_001201831.2 NP_001188760 NP_001188760.1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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