Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
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Metazoan Compara
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DB built by FlyBase

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Gene: CG30270 FBgn0061435

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Gene Synonyms

Location

Primary_assembly 2R: 22,784,304-22,784,932 forward strand.

BDGP6.32:AE013599.5

About this gene

This gene has 3 transcripts (splice variants), 15 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG30270-RE	FBtr0473596	573	146aa	FBpp0423059	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4W0WZA6 Q8T8S7	NM_001369993	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
CG30270-RF	FBtr0473597	563	130aa	FBpp0423060	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4P7VAA3	NM_001369994	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
CG30270-RD	FBtr0300125	563	78aa	FBpp0289402	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8MME3	NM_166552.3 NM_166553 NM_166553.3 NP_726241.2 NP_726242 NP_726242.2	-

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Summary

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Gene-based displays