Summary
- Splice variants
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Metazoan Compara
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DB built by FlyBase

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Gene: Ctr1A FBgn0062413

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Description

Copper transporter 1A

Gene Synonyms

Location

Primary_assembly X: 6,661,647-6,668,258 forward strand.

BDGP6.32:AE014298.5

About this gene

This gene has 4 transcripts (splice variants), 76 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Ctr1A-RC	FBtr0308593	1601	241aa	FBpp0300817	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C8VV93 M9NE97 Q8MQM5	NM_001258623 NM_001258623.2 NM_001258624.1 NP_001245552 NP_001245552.1 NP_001245553.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
Ctr1A-RA	FBtr0070951	2103	231aa	FBpp0070912	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9W3X9	NM_001258622.2 NM_132108 NM_132108.3 NP_001245551.1 NP_572336 NP_572336.2	-
Ctr1A-RB	FBtr0308592	1575	231aa	FBpp0300816	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9W3X9	NM_001258622 NM_001258622.2 NM_132108.3 NP_001245551 NP_001245551.1 NP_572336.2	-
Ctr1A-RD	FBtr0308594	1503	241aa	FBpp0300818	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9NE97	NM_001258623.2 NM_001258624 NM_001258624.1 NP_001245552.1 NP_001245553 NP_001245553.1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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Gene-based displays