Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
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Literature
Metazoan Compara
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- Gene gain/loss tree
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Pan-taxonomic Compara
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DB built by FlyBase

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Gene: e(y)3 FBgn0087008

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Description

enhancer of yellow 3

Gene Synonyms

Location

Primary_assembly X: 19,626,548-19,638,369 reverse strand.

BDGP6.32:AE014298.5

About this gene

This gene has 5 transcripts (splice variants), 167 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
e(y)3-RC	FBtr0334279	7200	2012aa	FBpp0306394	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PI16	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
e(y)3-RB	FBtr0334278	7784	2006aa	FBpp0306393	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PHL0 Q9VWF2	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
e(y)3-RD	FBtr0334280	7718	2011aa	FBpp0306395	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PHZ0	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
e(y)3-RA	FBtr0074762	6937	2006aa	FBpp0074531	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PHL0 Q9VWF2	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
e(y)3-RE	FBtr0334281	6531	2006aa	FBpp0306396	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PHL0 Q9VWF2	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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