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DB built by FlyBase

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Gene: Vrp1 FBgn0243516

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Description

Verprolin 1

Gene Synonyms

Location

Primary_assembly 2R: 22,106,107-22,122,562 reverse strand.

BDGP6.32:AE013599.5

About this gene

This gene has 12 transcripts (splice variants) and 55 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Vrp1-RG	FBtr0113104	4017	852aa	FBpp0112017	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8DYL3	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
Vrp1-RJ	FBtr0302297	3888	809aa	FBpp0291503	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JGR7	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Vrp1-RA	FBtr0071793	3823	751aa	FBpp0071706	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q0E8Y8	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Vrp1-RB	FBtr0071791	3686	751aa	FBpp0071704	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q0E8Y8	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Vrp1-RI	FBtr0302296	3410	809aa	FBpp0291502	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JGR7	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Vrp1-RF	FBtr0071792	3407	708aa	FBpp0071705	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8SX98	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Vrp1-RC	FBtr0071795	3345	751aa	FBpp0071708	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q0E8Y8	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Vrp1-RD	FBtr0071794	3331	751aa	FBpp0071707	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q0E8Y8	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Vrp1-RL	FBtr0342980	3281	767aa	FBpp0309744	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4LH48	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Vrp1-RE	FBtr0071796	3263	761aa	FBpp0071709	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7KVL6	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Vrp1-RK	FBtr0302298	3216	708aa	FBpp0291504	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8SX98	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Vrp1-RH	FBtr0302295	3134	718aa	FBpp0291501	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C6TPC3 E1JGR9	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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