Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
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Literature
Metazoan Compara
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Pan-taxonomic Compara
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DB built by FlyBase

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Gene: CG42260 FBgn0259145

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Location

Primary_assembly 2R: 22,740,999-22,798,289 reverse strand.

BDGP6.32:AE013599.5

About this gene

This gene has 4 transcripts (splice variants), 143 orthologues and 8 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG42260-RB	FBtr0299573	7264	974aa	FBpp0288848	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9W1Z8	NM_137873 NM_137873.3 NP_611717 NP_611717.2	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
CG42260-RD	FBtr0330241	6102	1247aa	FBpp0303274	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4KGC3	NM_001274212 NM_001274212.1 NP_001261141 NP_001261141.1
CG42260-RA	FBtr0299572	5685	1249aa	FBpp0288847	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q058W8 Q1RKR2 Q9W201	NM_137871 NM_137871.4 NP_611715 NP_611715.3	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
CG42260-RE	FBtr0474145	5685	1269aa	FBpp0423144	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4P7VAE4	NM_001370013	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5

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Summary

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Gene-based displays