Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

DB built by FlyBase

.

Gene: CG42336 FBgn0259238

.

Location

Primary_assembly 2R: 11,294,536-11,297,520 reverse strand.

BDGP6.32:AE013599.5

About this gene

This gene has 5 transcripts (splice variants) and 4 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG42336-RF	FBtr0303157	901	140aa	FBpp0292256	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1Z8I8	NM_001201978 NM_001201978.2 NM_136823.4 NP_001188907 NP_001188907.1 NP_610667.2	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
CG42336-RC	FBtr0299854	747	138aa	FBpp0289132	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7JWT7	NM_165820 NM_165820.2 NP_725026 NP_725026.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
CG42336-RD	FBtr0299855	707	162aa	FBpp0289133	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B7YZF1	NM_001144172 NM_001144172.2 NP_001137644 NP_001137644.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5
CG42336-RE	FBtr0299856	686	140aa	FBpp0289134	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1Z8I8	NM_001201978.2 NM_136823 NM_136823.4 NP_001188907.1 NP_610667 NP_610667.2	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
CG42336-RB	FBtr0299853	509	65aa	FBpp0289131	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1Z8I6	NM_136824 NM_136824.4 NP_610668 NP_610668.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2

.

Summary

.

.

Gene-based displays