▼

Loading…

Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree (Metazoa)
- Gene tree (Protostomes)
- Gene tree (Insects)
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

DB built by FlyBase

.

Gene: Ir40a FBgn0259683

.

Description

Ionotropic receptor 40a

Gene Synonyms

Location

Primary_assembly 2L: 22,189,526-22,214,376 reverse strand.

BDGP6.46:AE014134.6

About this gene

This gene has 3 transcripts (splice variants), 51 orthologues and 41 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Ir40a-RF	FBtr0336971	2368	732aa	FBpp0307914	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9V9N1	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
Ir40a-RE	FBtr0334170	1229	280aa	FBpp0306287	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PGG3	-	-
Ir40a-RG	FBtr0344025	1160	223aa	FBpp0310475	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X2JAN0	-	-

.

Summary

.

.