Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
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- Orthologues
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
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External references
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ID History
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DB built by FlyBase

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Gene: CG42402 FBgn0259821

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Location

Primary_assembly 3R: 4,077,939-4,104,326 forward strand.

BDGP6.32:AE014297.3

About this gene

This gene has 3 transcripts (splice variants), 186 orthologues and 20 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG42402-RD	FBtr0336454	4915	737aa	FBpp0307560	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8BPV3 C9QPE4	NM_001144066.3 NM_001276243 NM_001276243.1 NP_001137538.2 NP_001263172 NP_001263172.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2
CG42402-RE	FBtr0339974	4654	747aa	FBpp0308995	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H1UUM0	NM_001300713 NM_001300713.1 NP_001287642 NP_001287642.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5
CG42402-RC	FBtr0301942	4016	737aa	FBpp0291154	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8BPV3	NM_001144066 NM_001144066.3 NM_001276243.1 NP_001137538 NP_001137538.2 NP_001263172.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2

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Summary

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Gene-based displays