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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree (Metazoa)
- Gene tree (Protostomes)
- Gene tree (Insects)
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Pan-taxonomic Compara
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DB built by FlyBase

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Gene: CG42404 FBgn0259823

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Location

Primary_assembly 3R: 15,250,094-15,257,765 forward strand.

BDGP6.46:AE014297.3

About this gene

This gene has 3 transcripts (splice variants) and 16 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG42404-RE	FBtr0305614	5523	1133aa	FBpp0294062	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VFA8	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
CG42404-RF	FBtr0345173	5536	105aa	FBpp0311382	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0C4DHG7	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG42404-RD	FBtr0305613	4825	1133aa	FBpp0294061	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8MRY6 Q9VFA8	-	-

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Summary

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