Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
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- Orthologues
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
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Genetic Variation
- Variant table
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- Structural variants
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DB built by FlyBase

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Gene: CG42524 FBgn0260429

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Gene Synonyms

Location

Primary_assembly 2R: 15,613,854-15,657,214 forward strand.

BDGP6.32:AE013599.5

About this gene

This gene has 3 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG42524-RC	FBtr0340006	2167	85aa	FBpp0309025	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1A6V8 E1JH75	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG42524-RA	FBtr0300853	1984	85aa	FBpp0290076	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JH75	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG42524-RB	FBtr0304712	1881	85aa	FBpp0293255	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JH75	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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