Antennapedia
Primary_assembly 3R: 6,896,253-6,999,228 reverse strand.
BDGP6.32:AE014297.3
This gene has 12 transcripts (splice variants), 145 orthologues and 14 paralogues.
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | UniProt | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|
| Antp-RL | FBtr0081652 | 4902 | 378aa | FBpp0081162 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A4V2I6 D6W4V0 P02833 | NM_206445.1 NM_206446.1 NM_206448 NM_206448.1 NM_206453.1 NM_206454.1 NP_996167.1 NP_996168.1 NP_996170 NP_996170.1 NP_996175.1 NP_996176.1 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, |
| Antp-RD | FBtr0081648 | 4890 | 374aa | FBpp0089241 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q7KSY5 | NM_206449.1 NM_206452 NM_206452.1 NP_996171.1 NP_996174 NP_996174.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| Antp-RF | FBtr0081653 | 4863 | 365aa | FBpp0089244 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q7KSY6 | NM_206447 NM_206447.1 NM_206450.1 NP_996169 NP_996169.1 NP_996172.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| Antp-RK | FBtr0081656 | 4851 | 361aa | FBpp0089247 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q7KSY7 | NM_206444 NM_206444.1 NM_206451.1 NP_996166 NP_996166.1 NP_996173.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| Antp-RM | FBtr0081647 | 4691 | 378aa | FBpp0081161 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A4V2I6 P02833 | NM_206445.1 NM_206446.1 NM_206448.1 NM_206453 NM_206453.1 NM_206454.1 NP_996167.1 NP_996168.1 NP_996170.1 NP_996175 NP_996175.1 NP_996176.1 | APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, |
| Antp-RN | FBtr0081651 | 4679 | 374aa | FBpp0089086 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q7KSY5 | NM_206449 NM_206449.1 NM_206452.1 NP_996171 NP_996171.1 NP_996174.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| Antp-RE | FBtr0081650 | 4652 | 365aa | FBpp0089243 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q7KSY6 | NM_206447.1 NM_206450 NM_206450.1 NP_996169.1 NP_996172 NP_996172.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| Antp-RG | FBtr0081649 | 4640 | 361aa | FBpp0089242 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q7KSY7 | NM_206444.1 NM_206451 NM_206451.1 NP_996166.1 NP_996173 NP_996173.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| Antp-RH | FBtr0081646 | 4111 | 297aa | FBpp0081160 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | NM_206454 NM_206454.1 NP_996176 NP_996176.1 | - |
| Antp-RO | FBtr0479859 | 3978 | 365aa | FBpp0428195 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q7KSY6 | NM_206447.1 NM_206450.1 NP_996169.1 NP_996172.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| Antp-RJ | FBtr0081655 | 3490 | 378aa | FBpp0089246 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A4V2I6 P02833 | NM_206445 NM_206445.1 NM_206446.1 NM_206448.1 NM_206453.1 NM_206454.1 NP_996167 NP_996167.1 NP_996168.1 NP_996170.1 NP_996175.1 NP_996176.1 | APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, |
| Antp-RI | FBtr0081654 | 3279 | 378aa | FBpp0089245 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A4V2I6 P02833 | NM_206445.1 NM_206446 NM_206446.1 NM_206448.1 NM_206453.1 NM_206454.1 NP_996167.1 NP_996168 NP_996168.1 NP_996170.1 NP_996175.1 NP_996176.1 | APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, |
![[RSS logo]](/i/rss_icon_16.png "Ensembl blog"){kind=icon}
![[twitter logo]](/i/twitter.png "Follow us on Twitter!")
