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DB built by FlyBase

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Gene: tay FBgn0260938

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Description

tay bridge

Gene Synonyms

Location

Primary_assembly X: 15,876,368-15,887,311 reverse strand.

BDGP6.32:AE014298.5

About this gene

This gene has 4 transcripts (splice variants) and 65 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
tay-RB	FBtr0310065	8651	2486aa	FBpp0301766	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VXM5	NM_001272656 NM_001272656.2 NM_001272657.2 NM_132858.3 NP_001259585 NP_001259585.1 NP_001259586.1 NP_573086.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
tay-RA	FBtr0074167	8361	2486aa	FBpp0073960	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VXM5	NM_001272656.2 NM_001272657.2 NM_132858 NM_132858.3 NP_001259585.1 NP_001259586.1 NP_573086 NP_573086.2	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
tay-RD	FBtr0340414	8358	2485aa	FBpp0309360	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X2JC54	NM_001298376 NM_001298376.1 NP_001285305 NP_001285305.1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
tay-RC	FBtr0310066	8256	2486aa	FBpp0301767	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VXM5	NM_001272656.2 NM_001272657 NM_001272657.2 NM_132858.3 NP_001259585.1 NP_001259586 NP_001259586.1 NP_573086.2	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,

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Summary

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Gene-based displays