Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
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ID History
- Gene history

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DB built by FlyBase

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Gene: Sytbeta FBgn0261090

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Description

Synaptotagmin beta

Gene Synonyms

Location

Primary_assembly 3L: 15,014,695-15,064,977 reverse strand.

BDGP6.32:AE014296.5

About this gene

This gene has 2 transcripts (splice variants), 124 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Sytbeta-RD	FBtr0299849	3952	602aa	FBpp0289127	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VUJ3	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
Sytbeta-RC	FBtr0299848	3854	546aa	FBpp0289126	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AVU5 Q9VUJ6	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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