regeneration
Primary_assembly 3L: 21,382,501-21,424,416 forward strand.
BDGP6.32:AE014296.5
This gene has 4 transcripts (splice variants) and 57 orthologues.
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | UniProt | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|
| rgn-RC | FBtr0333385 | 3991 | 808aa | FBpp0305577 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | M9PFV8 | NM_001259937.2 NM_001275226 NM_001275226.1 NP_001246866.1 NP_001262155 NP_001262155.1 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, |
| rgn-RA | FBtr0078346 | 4322 | 800aa | FBpp0078002 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q9Y102 | NM_001275227.1 NM_141055 NM_141055.4 NP_001262156.1 NP_649312 NP_649312.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| rgn-RB | FBtr0309230 | 3942 | 808aa | FBpp0301169 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | M9PFV8 | NM_001259937 NM_001259937.2 NM_001275226.1 NP_001246866 NP_001246866.1 NP_001262155.1 | APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, |
| rgn-RD | FBtr0333386 | 3918 | 800aa | FBpp0305578 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q9Y102 | NM_001275227 NM_001275227.1 NM_141055.4 NP_001262156 NP_001262156.1 NP_649312.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
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