Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
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- Orthologues
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
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External references
Supporting evidence
ID History
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DB built by FlyBase

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Gene: rtv FBgn0261277

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Description

retroactive

Location

Primary_assembly X: 11,152,484-11,153,990 reverse strand.

BDGP6.32:AE014298.5

About this gene

This gene has 4 transcripts (splice variants) and 85 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
rtv-RD	FBtr0346379	1186	151aa	FBpp0312073	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VZ21	NM_001272513.2 NM_001298185 NM_001298185.1 NM_132465.4 NP_001259442.1 NP_001285114 NP_001285114.1 NP_572693.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5
rtv-RA	FBtr0073470	1063	151aa	FBpp0073326	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B4F5Y8 B4F5Z0 B4F5Z3 B4F5Z5 B4F5Z6 Q9VZ21	NM_001272513.2 NM_001298185.1 NM_132465 NM_132465.4 NP_001259442.1 NP_001285114.1 NP_572693 NP_572693.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5
rtv-RB	FBtr0331742	1006	151aa	FBpp0304131	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VZ21	NM_001272513 NM_001272513.2 NM_001298185.1 NM_132465.4 NP_001259442 NP_001259442.1 NP_001285114.1 NP_572693.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS P5
rtv-RC	FBtr0331743	964	65aa	FBpp0304132	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PJI2	NM_001272514 NM_001272514.2 NP_001259443 NP_001259443.1	APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.APPRIS ALT2

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Summary

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Gene-based displays