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DB built by FlyBase

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Gene: ymp FBgn0261287

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Description

yellow-emperor

Gene Synonyms

Location

Primary_assembly 3R: 25,591,502-25,609,127 reverse strand.

BDGP6.32:AE014297.3

About this gene

This gene has 4 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
ymp-RD	FBtr0344092	1066	186aa	FBpp0310517	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4LHY0	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ymp-RA	FBtr0084894	1270	139aa	FBpp0084268	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VBQ0	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ymp-RC	FBtr0344091	1247	173aa	FBpp0310516	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4LHN5	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ymp-RB	FBtr0084895	842	146aa	FBpp0084269	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1EBY6 Q8IMS7	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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