Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
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Literature
Metazoan Compara
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- Gene gain/loss tree
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Pan-taxonomic Compara
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DB built by FlyBase

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Gene: Exn FBgn0261547

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Description

Ephexin

Gene Synonyms

Location

Primary_assembly 3L: 16,970,013-16,994,388 forward strand.

BDGP6.32:AE014296.5

About this gene

This gene has 5 transcripts (splice variants) and 4 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Exn-RE	FBtr0302651	6987	2029aa	FBpp0291791	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8E6R5 C7LAC5 Q9VVC6	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
Exn-RD	FBtr0302650	6887	2029aa	FBpp0291790	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VVC6	-	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
Exn-RB	FBtr0302647	3506	1051aa	FBpp0291787	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9Y150	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Exn-RA	FBtr0302649	3499	1051aa	FBpp0291789	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9Y150	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Exn-RC	FBtr0302648	3475	1051aa	FBpp0291788	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9Y150	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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