Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
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Pan-taxonomic Compara
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- Orthologues
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Genetic Variation
- Variant table
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DB built by FlyBase

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Gene: CG42782 FBgn0261853

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Gene Synonyms

Location

Primary_assembly 2R: 12,418,797-12,419,395 reverse strand.

BDGP6.32:AE013599.5

About this gene

This gene has 2 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG42782-RB	FBtr0347196	599	46aa	FBpp0312503	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4JCR3	NM_001201981.2 NM_001316417 NM_001316417.1 NP_001188910.1 NP_001303346 NP_001303346.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG42782-RA	FBtr0303428	282	46aa	FBpp0292485	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4JCR3	NM_001201981 NM_001201981.2 NM_001316417.1 NP_001188910 NP_001188910.1 NP_001303346.1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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