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DB built by FlyBase

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Gene: Csk FBgn0262081

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Description

C-terminal Src kinase

Gene Synonyms

Location

Primary_assembly 3R: 11,633,278-11,650,706 reverse strand.

BDGP6.32:AE014297.3

About this gene

This gene has 7 transcripts (splice variants), 176 orthologues and 11 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Csk-RG	FBtr0299729	5093	1052aa	FBpp0289007	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A4IJ55 Q6NP28 Q8INJ8	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
Csk-RL	FBtr0335449	4832	1052aa	FBpp0307427	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8INJ8	-	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
Csk-RI	FBtr0300547	4524	723aa	FBpp0289774	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7KSQ2	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Csk-RK	FBtr0300549	4172	723aa	FBpp0289776	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7KSQ2	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Csk-RH	FBtr0300546	4088	805aa	FBpp0289773	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6NP28 Q9VGK8	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Csk-RJ	FBtr0300548	3952	723aa	FBpp0289775	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7KSQ2	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Csk-RF	FBtr0299728	3946	723aa	FBpp0289006	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7KSQ2	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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