Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
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Literature
Metazoan Compara
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Pan-taxonomic Compara
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DB built by FlyBase

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Gene: nrm FBgn0262509

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Description

neuromusculin

Gene Synonyms

Location

Primary_assembly 3L: 22,998,372-23,040,300 forward strand.

BDGP6.32:AE014296.5

About this gene

This gene has 6 transcripts (splice variants), 171 orthologues and 6 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
nrm-RE	FBtr0304833	7348	2192aa	FBpp0293373	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D0IQL2 D0IQL8 D0IQL9 D2NUF0 M9NE05 Q24273 Q6IKS0	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
nrm-RI	FBtr0333221	8333	1846aa	FBpp0305423	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PGA2	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
nrm-RH	FBtr0304836	4608	1209aa	FBpp0293376	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9NGD9	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
nrm-RB	FBtr0304831	4067	1036aa	FBpp0293371	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q0E8B8	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
nrm-RF	FBtr0304834	4063	1097aa	FBpp0293374	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9NEJ8	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
nrm-RA	FBtr0304830	4033	1087aa	FBpp0293370	Gene/transcipt that contains an open reading frame (ORF).Protein coding	D2NUE2 Q9VNP2	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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