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- Splice variants
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DB built by FlyBase

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Gene: Ih FBgn0263397

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Description

I[[h]] channel

Gene Synonyms

Location

Primary_assembly 2R: 14,276,130-14,300,095 forward strand.

BDGP6.46:AE013599.5

About this gene

This gene has 11 transcripts (splice variants), 98 orthologues and 8 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Ih-RE	FBtr0100372	8257	1327aa	FBpp0099780	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1Z9N7 Q56JH7	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
Ih-RB	FBtr0100369	8900	1290aa	FBpp0099777	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1Z9N8 Q56JH8 Q56JI0	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
Ih-RG	FBtr0290110	7042	1322aa	FBpp0288549	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B7YZE8	-	-
Ih-RC	FBtr0100370	6988	618aa	FBpp0099778	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q56JH9	-	-
Ih-RF	FBtr0290109	6961	1295aa	FBpp0288548	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B7YZE7 F7VJU3 Q9Y1J9	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Ih-RH	FBtr0290111	6038	917aa	FBpp0288550	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B7YZE9 D6W4X1	-	-
Ih-RM	FBtr0308837	4152	245aa	FBpp0300994	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q95T40	-	-
Ih-RL	FBtr0308836	2526	618aa	FBpp0300993	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q56JH9	-	-
Ih-RJ	FBtr0308834	2524	618aa	FBpp0300991	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q56JH9	-	-
Ih-RK	FBtr0308835	2485	618aa	FBpp0300992	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q56JH9	-	-
Ih-RI	FBtr0290292	2383	601aa	FBpp0288731	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1Z9P0	-	-

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Summary

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