Summary
- Splice variants
- Transcript comparison
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Metazoan Compara
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- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
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- Orthologues
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- GO: Biological process
- GO: Molecular function
- GO: Cellular component
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Genetic Variation
- Variant table
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- Structural variants
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DB built by FlyBase

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Gene: CG44000 FBgn0264742

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Location

Primary_assembly 2L: 5,043,270-5,048,365 forward strand.

BDGP6.32:AE014134.6

About this gene

This gene has 5 transcripts (splice variants) and 25 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG44000-RC	FBtr0334121	2691	135aa	FBpp0306238	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PCM2	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG44000-RE	FBtr0334122	2431	135aa	FBpp0306239	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PCM2	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG44000-RF	FBtr0334123	2415	135aa	FBpp0306240	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PCM2	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG44000-RB	FBtr0334119	2308	135aa	FBpp0306236	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PCM2	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG44000-RD	FBtr0334120	2281	135aa	FBpp0306237	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PCM2	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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