Summary
- Splice variants
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Sequence
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Metazoan Compara
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- Gene tree
- Gene gain/loss tree
- Orthologues
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Pan-taxonomic Compara
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- Orthologues
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- GO: Biological process
- GO: Molecular function
- GO: Cellular component
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Genetic Variation
- Variant table
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Supporting evidence
ID History
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DB built by FlyBase

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Gene: CG44085 FBgn0264894

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Location

Primary_assembly 2L: 13,261,008-13,284,043 forward strand.

BDGP6.32:AE014134.6

About this gene

This gene has 13 transcripts (splice variants) and 49 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG44085-RO	FBtr0334862	8804	2381aa	FBpp0306886	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PDE7	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
CG44085-RP	FBtr0334863	8383	2246aa	FBpp0306887	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VK08	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
CG44085-RF	FBtr0334854	4043	902aa	FBpp0306878	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8DZ00	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
CG44085-RN	FBtr0334861	3940	1007aa	FBpp0306885	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9ND82	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
CG44085-RC	FBtr0334851	3868	836aa	FBpp0306875	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IP74 Q8MQP0	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
CG44085-RJ	FBtr0334858	3864	979aa	FBpp0306882	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JHH0	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
CG44085-RK	FBtr0334859	3856	979aa	FBpp0306883	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JHH0	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
CG44085-RG	FBtr0334855	3840	942aa	FBpp0306879	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8DYZ9	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
CG44085-RD	FBtr0334852	3768	918aa	FBpp0306876	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q8IP76	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
CG44085-RI	FBtr0334857	3661	833aa	FBpp0306881	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C3KKC6 Q8MQP0	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
CG44085-RM	FBtr0334856	3494	864aa	FBpp0306880	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C6SUY0 Q1WWG2	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
CG44085-RL	FBtr0334860	3418	833aa	FBpp0306884	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C3KKC6	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
CG44085-RH	FBtr0334853	3282	756aa	FBpp0306877	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A4V0N7 Q86PD9	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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