Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
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Pan-taxonomic Compara
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DB built by FlyBase

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Gene: CG42688 FBgn0265263

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Location

Primary_assembly 2L: 19,181,965-19,182,810 reverse strand.

BDGP6.32:AE014134.6

About this gene

This gene has 2 transcripts (splice variants) and 9 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG42688-RB	FBtr0332576	785	50aa	FBpp0304828	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F0JAR8	NM_001201914.2 NM_001273635 NM_001273635.1 NP_001188843.1 NP_001260564 NP_001260564.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
CG42688-RA	FBtr0302890	397	50aa	FBpp0292021	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F0JAR8	NM_001201914 NM_001201914.2 NM_001273635.1 NP_001188843 NP_001188843.1 NP_001260564.1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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Gene-based displays