PDZ domain-containing guanine nucleotide exchange factor
Primary_assembly 2L: 6,323,767-6,332,789 forward strand.
BDGP6.32:AE014134.6
This gene has 4 transcripts (splice variants), 131 orthologues and 7 paralogues.
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | UniProt | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|
| PDZ-GEF-RA | FBtr0079249 | 6067 | 1573aa | FBpp0078879 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q95V18 Q9VMF3 | NM_135168 NM_135168.5 NP_609012 NP_609012.2 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, |
| PDZ-GEF-RD | FBtr0333242 | 6823 | 1569aa | FBpp0305443 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B7Z025 | NM_001144325.2 NM_001273197 NM_001273197.1 NP_001137797.1 NP_001260126 NP_001260126.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| PDZ-GEF-RB | FBtr0300038 | 5912 | 1569aa | FBpp0289315 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B7Z025 B8Q6A6 D3DMF4 | NM_001144325 NM_001144325.2 NM_001273197.1 NP_001137797 NP_001137797.1 NP_001260126.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| PDZ-GEF-RC | FBtr0300039 | 5471 | 1422aa | FBpp0289316 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | B7Z026 B8Q6A8 | NM_001144326 NM_001144326.2 NP_001137798 NP_001137798.1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
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