Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
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Literature
Metazoan Compara
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Pan-taxonomic Compara
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DB built by FlyBase

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Gene: ebo FBgn0266572

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Description

ellipsoid body open

Gene Synonyms

Location

Primary_assembly X: 471,019-476,579 reverse strand.

BDGP6.32:AE014298.5

About this gene

This gene has 3 transcripts (splice variants) and 114 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
ebo-RC	FBtr0339443	4163	1054aa	FBpp0308529	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X2J9Y4	NM_001297810 NM_001297810.1 NP_001284739 NP_001284739.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ebo-RB	FBtr0339442	4160	1053aa	FBpp0308528	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X2JDN0	NM_001297809 NM_001297809.1 NP_001284738 NP_001284738.1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ebo-RA	FBtr0070098	4142	1047aa	FBpp0070093	Gene/transcipt that contains an open reading frame (ORF).Protein coding	O46055 Q8T9F5 Q9W5G1	NM_080140 NM_080140.3 NP_524879 NP_524879.2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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Gene-based displays