Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
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Metazoan Compara
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DB built by FlyBase

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Gene: CG46301 FBgn0283651

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Location

Primary_assembly 2L: 14,104,090-14,160,587 forward strand.

BDGP6.32:AE014134.6

About this gene

This gene has 4 transcripts (splice variants) and 93 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
CG46301-RE	FBtr0445730	5632	1237aa	FBpp0401605	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1W5PXH3	NM_001347777 NM_001347777.1 NP_001334737 NP_001334737.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
CG46301-RD	FBtr0445729	4048	636aa	FBpp0401604	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1W5Q009 F9W333	NM_135859 NM_135859.4 NP_609703 NP_609703.2	-
CG46301-RF	FBtr0445732	2458	667aa	FBpp0401607	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1W5PVN5 M9PCX5	NM_001347778 NM_001347778.1 NP_001334739 NP_001334739.1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
CG46301-RC	FBtr0445731	2385	623aa	FBpp0401606	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1W5PW03	NM_001347776 NM_001347776.1 NP_001334738 NP_001334738.1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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Gene-based displays