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DB built by FlyBase

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Gene: Camta FBgn0287478

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Description

Calmodulin-binding transcription activator

Gene Synonyms

Location

Primary_assembly 2R: 9,446,046-9,480,076 forward strand.

BDGP6.32:AE013599.5

About this gene

This gene has 7 transcripts (splice variants) and 119 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Camta-RF	FBtr0300527	6994	2044aa	FBpp0289754	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B7YZU4 Q95RQ6	NM_001144152 NM_001144152.2 NP_001137624 NP_001137624.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
Camta-RH	FBtr0339381	7588	1675aa	FBpp0308472	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4LF06	NM_001299320 NM_001299320.1 NP_001286249 NP_001286249.1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Camta-RI	FBtr0339382	6902	1988aa	FBpp0308473	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4LF15	NM_001299321 NM_001299321.1 NP_001286250 NP_001286250.1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Camta-RB	FBtr0299845	6877	2005aa	FBpp0289123	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B7YZU5	NM_001144153 NM_001144153.2 NP_001137625 NP_001137625.1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Camta-RG	FBtr0301766	6874	2004aa	FBpp0290980	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0SQK5 E1JH18	NM_001169627 NM_001169627.2 NP_001163098 NP_001163098.1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Camta-RD	FBtr0299846	6273	1881aa	FBpp0289124	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1Z7V0	NM_136647 NM_136647.5 NP_610491 NP_610491.4	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Camta-RE	FBtr0299847	6156	1842aa	FBpp0289125	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B7YZS4	NM_001144154 NM_001144154.2 NP_001137626 NP_001137626.1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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Gene-based displays