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DB built by FlyBase

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Gene: Camta FBgn0287478

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Description

Calmodulin-binding transcription activator

Gene Synonyms

Location

Primary_assembly 2R: 9,446,046-9,480,076 forward strand.

BDGP6.46:AE013599.5

About this gene

This gene has 7 transcripts (splice variants) and 75 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
Camta-RF	FBtr0300527	6994	2044aa	FBpp0289754	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B7YZU4 Q95RQ6	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
Camta-RH	FBtr0339381	7588	1675aa	FBpp0308472	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4LF06	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Camta-RI	FBtr0339382	6902	1988aa	FBpp0308473	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4LF15	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Camta-RB	FBtr0299845	6877	2005aa	FBpp0289123	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B7YZU5	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Camta-RG	FBtr0301766	6874	2004aa	FBpp0290980	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0SQK5 E1JH18	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Camta-RD	FBtr0299846	6273	1881aa	FBpp0289124	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1Z7V0	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
Camta-RE	FBtr0299847	6156	1842aa	FBpp0289125	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B7YZS4	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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