Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: FBtr0088709 PGRP-SC2-RA

Description

Peptidoglycan recognition protein SC2

Gene Synonyms

Location

About this transcript

This transcript has 1 exon, is annotated with 10 domains and features and maps to 30 oligo probes.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
PGRP-SC2-RA	FBtr0088709	746	184aa	FBpp0087788	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q2XY98 Q9V4X2	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 1, Coding exons: 1, Transcript length: 746 bps, Translation length: 184 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9V4X2

Version

FBtr0088709

Type

Protein coding

Annotation Method

RefSeq gene models from NCBI RefSeq using the GFF3 files available from the NCBI FTP site.