Hydractinia symbiolongicarpus (Hydrozoan, clone_291-10) Assembly and Gene Annotation
About Hydractinia symbiolongicarpus
Hydractinia symbiolongicarpus is one of the 30 + Hydractinia species known worldwide. This saltwater animal, from here on referred to as Hydractinia, is at the base of the Cnidaria phylum and in many ways, is similar to the freshwater Hydra. In the wild, Hydractinia feed on smaller invertebrates found in the shallow mud, however in laboratory environments they are fed brine shrimp. Hydractinia symbiolongicurpus and its sibling species, Hydractinia echinata, are the two species from the genus Hydractinia on which most work has been published.
Picture credit: Yale Peabody Museum, CC0 1.0 Universal, via Wikimedia Commons via Wikimedia Commons (Image source)
Taxonomy ID 13093
(Text from Wikipedia.)
More information General information about this species can be found in Wikipedia
Assembly
The assembly presented here has been imported from INSDC and is linked to the assembly accession [GCA_029227915.1].
The total length of the assembly is 480922349 bp contained within 78 scaffolds. The scaffold N50 value is 33314500, the scaffold L50 value is 7. The GC% content of the assembly is 36.0%.
Annotation
The annotation presented is derived from annotation submitted to INSDC with the assembly accession GCA_029227915.1.
Ensembl Metazoa displaying genes imported from NCBI RefSeq annotation release vGCF_029227915.1-RS_2023_06.html. Small RNA features, protein features, BLAST hits and cross-references have been computed by Ensembl Metazoa.
Statistics
Summary
Assembly | HSymV2.1, INSDC Assembly GCA_029227915.2, |
Database version | 113.1 |
Golden Path Length | 480,922,349 |
Genebuild by | NCBI |
Genebuild method | Import |
Data source | University of Vienna |
Gene counts
Coding genes | 20,492 |
Non coding genes | 29,783 |
Small non coding genes | 28,574 |
Long non coding genes | 1,209 |
Pseudogenes | 568 |
Gene transcripts | 59,663 |