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Octopus bimaculoides (Octopus, UCB-OBI-ISO-001) (Octopus_bimaculoides_v2_0)

Octopus bimaculoides (Octopus, UCB-OBI-ISO-001) Assembly and Gene Annotation

About Octopus bimaculoides

The California two-spot octopus, often simply called a "bimac", is an octopus species native to many parts of the Pacific Ocean including the coast of California. One can identify the species by the circular blue eyespots on each side of its head. Bimacs usually live to be about two years old. They are closely related to Verrill's two-spot octopus. In 2015, the genome was sequenced.

Picture credit: Public domain via Wikimedia Commons (Image source) (by Jeremy Selan)

Taxonomy ID 37653

(Text from Wikipedia.)

More information General information about this species can be found in Wikipedia

Assembly

The assembly presented here has been imported from INSDC and is linked to the assembly accession [GCA_001194135.1].

The total length of the assembly is 2338188782 bp contained within 151674 scaffolds. The scaffold N50 value is 475182, the scaffold L50 value is 1333. Assembly gaps span 353859886 bp.

Annotation

Ensembl Metazoa displaying genes imported from NCBI RefSeq annotation release v100. Small RNA features, protein features, BLAST hits and cross-references have been computed by Ensembl Metazoa.

Statistics

Summary

AssemblyOctopus_bimaculoides_v2_0, INSDC Assembly GCA_001194135.1,
Database version111.1
Golden Path Length2,338,188,782
Genebuild byNCBI
Genebuild methodImport
Data sourceVincent J. Coates Genomic Sequencing Laboratory at UC Berkeley

Gene counts

Coding genes15,842
Non coding genes2,299
Small non coding genes836
Long non coding genes1,463
Pseudogenes173
Gene transcripts27,144