Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Regulation
External references
Supporting evidence
ID History
- Gene history

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DB built by VectorBase

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Gene: MMP1 AGAP006904

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Description

matrix metalloprotease 1 [Source:VB Community Annotation]

Location

Chromosome 2L: 39,815,884-39,838,118 forward strand.

AgamP4:CM000356.1

About this gene

This gene has 3 transcripts (splice variants), 137 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	AGAP006904-RA	3741	570aa	AGAP006904-PA	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C6JXI6 C6JXI7 C6JXK3 Q7QIJ4	XM_001688055.1 XM_001688056.1 XM_308849.3 XP_001688107.1 XP_001688108.1 XP_308849.3
-	AGAP006904-RB	3415	570aa	AGAP006904-PB	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7QIJ4	XM_001688055.1 XM_001688056.1 XM_308849.3 XP_001688107.1 XP_001688108.1 XP_308849.3
-	AGAP006904-RC	3268	570aa	AGAP006904-PC	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7QIJ4	XM_001688055.1 XM_001688056.1 XM_308849.3 XP_001688107.1 XP_001688108.1 XP_308849.3

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Summary

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Gene-based displays