Description

voltage-gated sodium channel [Source:VB Community Annotation;Acc:AGAP004707]

Synonyms

kdr, VSC

Location
About this transcript

This transcript has 31 exons, is annotated with 68 domains and features, is associated with 22 variations and maps to 40 oligo probes.

Gene

This transcript is a product of gene AGAP004707 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
paraAGAP004707-RA63572118aaAGAP004707-PA
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
A5I843 A7ULH1 A7ULH2
C6F086 G3XGD5 G3XGD6
Q1WIQ8 Q4U0T5 Q4U0T6
Q5PTA1 Q5PTA3 Q5PTB3
Q5PTB5 Q5PTB7 Q5PTB9
Q5PTC1 Q5PTC3 Q5PTD1
Q5PTD7 Q66R26 Q66RC1
Q66RD9 Q66RX1 Q66RY2
Q7PJH0 U6BZV3
XM_318122
XP_318122
paraAGAP004707-RB62792092aaAGAP004707-PB
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
A7ULH1 A7ULH2 A7UUW1
C6F086 G3XGD5 G3XGD6
O45207 Q1WIQ8 Q4U0T5
Q4U0T6 Q5PTA1 Q5PTA3
Q5PTB3 Q5PTB5 Q5PTB7
Q5PTB9 Q5PTC1 Q5PTC3
Q5PTD1 Q5PTD7 Q66R26
Q66RC1 Q66RD9 Q66RX1
Q66RY2 U6BZV3
XM_001689051
XP_001689103
paraAGAP004707-RC62792092aaAGAP004707-PC
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
A7ULH1 A7ULH2 C6F086
G3XGD5 G3XGD6 Q1WIQ8
Q4U0T5 Q4U0T6 Q5PTA1
Q5PTA3 Q5PTB3 Q5PTB5
Q5PTB7 Q5PTB9 Q5PTC1
Q5PTC3 Q5PTD1 Q5PTD7
Q5TPQ2 Q66R26 Q66RC1
Q66RD9 Q66RX1 Q66RY2
U6BZV3
XM_554647
XP_554647
Statistics

Exons: 31 Coding exons: 31 Transcript length: 6,357 bps Translation length: 2,118 residues

Type

Known protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays