voltage-gated sodium channel [Source:VB Community Annotation;Acc:AGAP004707]


VSC, kdr

About this transcript

This transcript has 31 exons, is annotated with 60 domains and features, is associated with 22 variations and maps to 40 oligo probes.


This transcript is a product of gene AGAP004707

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Exons: 31 Coding exons: 31 Transcript length: 6,357 bps Translation length: 2,118 residues


Known protein coding

Prediction Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

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