Description

voltage-gated sodium channel [Source:VB Community Annotation;Acc:AGAP004707]

Synonyms

VSC, kdr

Location
About this transcript

This transcript has 31 exons, is annotated with 60 domains and features, is associated with 22 variations and maps to 40 oligo probes.

Gene

This transcript is a product of gene AGAP004707 Show transcript tableHide transcript table

NameTranscript IDbpProteinTranslation IDBiotypeUniProtRefSeqFlags
paraAGAP004707-RA63572118aaAGAP004707-PA
 
Protein coding
Q7PJH0 XM_318122
XP_318122
paraAGAP004707-RB62792092aaAGAP004707-PB
 
Protein coding
A7UUW1 XM_001689051
XP_001689103
paraAGAP004707-RC62792092aaAGAP004707-PC
 
Protein coding
Q5TPQ2 XM_554647
XP_554647
Statistics

Exons: 31, Coding exons: 31, Transcript length: 6,357 bps, Translation length: 2,118 residues

Type

Known protein coding

Annotation Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

Transcript-based displays