Description

voltage-gated sodium channel [Source:VB Community Annotation;Acc:AGAP004707]

Synonyms

VSC, kdr

Location
About this transcript

This transcript has 31 exons, is annotated with 60 domains and features, is associated with 22 variations and maps to 40 oligo probes.

Gene

This transcript is a product of gene AGAP004707

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Statistics

Exons: 31 Coding exons: 31 Transcript length: 6,357 bps Translation length: 2,118 residues

Type

Known protein coding

Prediction Method

Genes were annotated by merging Ensembl and TIGR prediction sets. The Ensembl automatic analysis pipeline used either a GeneWise/Exonerate model from a known protein or a set of aligned cDNAs/ESTs followed by an ORF prediction. GeneWise/Exonerate models are further combined with available aligned cDNAs/ESTs to annotate UTRs (for more information see V.Curwen et al., Genome Res. 2004 14:942-50). TIGR annotations were based on Augustus (M. Stanke), GlimmerHMM (M. Pertea), Genie (D. Kulp), and Twinscan (M. Brent) gene predictions, coupled with protein and EST genome alignments.

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