Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree (Metazoa)
- Gene tree (Protostomes)
- Gene tree (Insects)
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Gene: LOC409448

Description

collagen alpha-1(IX) chain, transcript variant X2

Location

Amel_HAv3.1:CM009936.2

About this gene

Transcripts

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	XM_026441175	3462	917aa	XP_026296960	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A088AKV1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	XM_026441177	3361	883aa	XP_026296962	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	XM_026441176	3354	883aa	XP_026296961	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	XM_026441178	2820	780aa	XP_026296963	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	XM_026441179	2789	746aa	XP_026296964	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

EMBL-EBI User Survey 2024