Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: XM_026441178

Description

collagen alpha-1(IX) chain, transcript variant X2

Location

About this transcript

This transcript has 17 exons and is annotated with 29 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	XM_026441175	3462	917aa	XP_026296960	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A088AKV1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	XM_026441177	3361	883aa	XP_026296962	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	XM_026441176	3354	883aa	XP_026296961	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	XM_026441178	2820	780aa	XP_026296963	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	XM_026441179	2789	746aa	XP_026296964	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 17, Coding exons: 16, Transcript length: 2,820 bps, Translation length: 780 residues

Version

XM_026441178

Type

Protein coding

Annotation Method

RefSeq gene models from NCBI RefSeq using the GFF3 files available from the NCBI FTP site.