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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree (Metazoa)
- Gene tree (Protostomes)
- Gene tree (Insects)
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
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- Structural variants
Gene expression
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ID History
- Gene history

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Gene: LOC408331

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Description

histone deacetylase 5, transcript variant X4

Location

Primary_assembly CM009941.2: 16,219,663-16,243,418 forward strand.

Amel_HAv3.1:CM009941.2

About this gene

This gene has 12 transcripts (splice variants), 82 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	XM_006570444	5842	1095aa	XP_006570507	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	XM_006570449	8750	1049aa	XP_006570512	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	XM_006570450	8747	1049aa	XP_006570513	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	XM_006570446	8432	1049aa	XP_006570509	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	XM_006570447	8387	1049aa	XP_006570510	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	XM_006570448	8325	1049aa	XP_006570511	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	XM_391882	5839	1094aa	XP_391882	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	XM_016914704	5839	1094aa	XP_016770193	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A087ZWJ2	-
-	XM_006570445	5782	1075aa	XP_006570508	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	XM_006570452	5704	1049aa	XP_006570515	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	XM_006570453	5701	1048aa	XP_006570516	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	XM_006570451	5101	1049aa	XP_006570514	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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