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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree (Metazoa)
- Gene tree (Protostomes)
- Gene tree (Insects)
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
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ID History
- Gene history

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Gene: LOC412839

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Description

homeobox protein caupolican, transcript variant X2

Location

Primary_assembly CM009941.2: 1,844,899-1,885,038 forward strand.

Amel_HAv3.1:CM009941.2

About this gene

This gene has 8 transcripts (splice variants), 54 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	XM_016915209	2748	666aa	XP_016770698	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	XM_026443720	8687	622aa	XP_026299505	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A088AU13	-	-
-	XM_006558940	4345	627aa	XP_006559003	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-
-	XM_396291	3145	622aa	XP_396291	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A088AU13	-	-
-	XM_026443721	3138	622aa	XP_026299506	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A088AU13	-	-
-	XM_026443722	2831	622aa	XP_026299507	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A088AU13	-	-
-	XM_016915211	2644	558aa	XP_016770700	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-
-	XM_006558939	2639	666aa	XP_006559002	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	-

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Summary

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