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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree (Metazoa)
- Gene tree (Protostomes)
- Gene tree (Insects)
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
- GO: Biological process
- GO: Cellular component
- GO: Molecular function
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: LOC100578321

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Description

host cell factor 2, transcript variant X5

Location

Primary_assembly CM009943.2: 2,865,733-2,884,511 reverse strand.

Amel_HAv3.1:CM009943.2

About this gene

This gene has 13 transcripts (splice variants), 57 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	XM_006557843	3953	787aa	XP_006557906	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	XM_016915714	4661	739aa	XP_016771203	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	XM_016915712	3928	779aa	XP_016771201	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A088ASR5	-
-	XM_026444758	3870	787aa	XP_026300543	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	XM_026444759	3808	787aa	XP_026300544	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	XM_016915715	3659	736aa	XP_016771204	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	XM_006557845	3530	787aa	XP_006557908	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	XM_016915716	3473	736aa	XP_016771205	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	XM_026444760	3135	742aa	XP_026300545	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	XM_016915718	2966	736aa	XP_016771207	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	XM_016915713	2923	748aa	XP_016771202	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	XM_016915717	2868	736aa	XP_016771206	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	XR_001705306	5484	No protein	-	Nontranslating CDS	-	-

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Summary

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