Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: LOC409670

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Description

protein tyrosine phosphatase type IVA 1, transcript variant X5

Location

Primary_assembly CM009940.2: 4,309,081-4,384,999 reverse strand.

Amel_HAv3.1:CM009940.2

About this gene

This gene has 6 transcripts (splice variants), 218 orthologues and 5 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	XM_016914308	6182	776aa	XP_016769797	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A088AVW1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	XM_026443348	6275	687aa	XP_026299133	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	XM_006561216	4982	175aa	XP_006561279	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	XM_016914311	4817	175aa	XP_016769800	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	XM_016914312	4497	175aa	XP_016769801	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	XM_016914313	4447	175aa	XP_016769802	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A088AVW5	-

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Summary

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