Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: XM_006566900

Description

caspase-1, transcript variant X2

Location

About this transcript

This transcript has 5 exons and is annotated with 10 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	XM_003250928	1247	304aa	XP_003250976	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A088AKB6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	XM_006566897	1424	273aa	XP_006566960	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
-	XM_006566900	895	236aa	XP_006566963	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 895 bps, Translation length: 236 residues

Version

XM_006566900

Type

Protein coding

Annotation Method

RefSeq gene models from NCBI RefSeq using the GFF3 files available from the NCBI FTP site.