Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: XM_396292

Description

homeobox protein caupolican, transcript variant X1

Location

About this transcript

This transcript has 7 exons and is annotated with 31 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	Flags
-	XM_396292	5496	677aa	XP_396292	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
-	XM_006558938	6773	656aa	XP_006559001	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A088AU11	-
-	XM_026443652	6373	524aa	XP_026299437	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A088AU11	-
-	XM_026443651	6083	571aa	XP_026299436	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 5,496 bps, Translation length: 677 residues

Version

XM_396292

Type

Protein coding

Annotation Method

RefSeq gene models from NCBI RefSeq using the GFF3 files available from the NCBI FTP site.