Summary
- Splice variants
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- GO: Biological process
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DB built by WormBase

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Gene: nhr-34 WBGene00003627

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Description

Nuclear hormone receptor family member nhr-34 [Source:NCBI gene;Acc:177800]

Location

Chromosome IV: 9,664,360-9,675,672 reverse strand.

WBcel235:BX284604.4

About this gene

This gene has 5 transcripts (splice variants), 130 orthologues and 40 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	F58G6.5c.2	2285	631aa	F58G6.5c.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q21006	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
-	F58G6.5b.1	2175	613aa	F58G6.5b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q21006	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
-	F58G6.5c.1	1905	631aa	F58G6.5c.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q21006	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
-	F58G6.5a.1	1863	499aa	F58G6.5a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q21006	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
-	F58G6.5d.1	1692	563aa	F58G6.5d.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q21006	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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