Apical junction molecule [Source:NCBI gene;Acc:181148]
Chromosome X: 9,082,946-9,113,619 forward strand.
WBcel235:BX284606.5
This gene has 16 transcripts (splice variants) and 1 orthologue.
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | UniProt | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|
| - | C25A11.4a.1 | 6044 | 1480aa | C25A11.4a.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A1C3NSL9 | - | APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4, |
| - | C25A11.4d.1 | 5898 | 1864aa | C25A11.4d.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A1C3NSL9 | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| - | C25A11.4f.1 | 5718 | 1905aa | C25A11.4f.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A1C3NSL9 | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| - | C25A11.4a.2 | 5558 | 1480aa | C25A11.4a.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A1C3NSL9 | - | APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4, |
| - | C25A11.4a.3 | 5394 | 1480aa | C25A11.4a.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A1C3NSL9 | - | APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4, |
| - | C25A11.4c.1 | 5141 | 1573aa | C25A11.4c.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q95ZY7 | - | - |
| - | C25A11.4b.1 | 5046 | 1293aa | C25A11.4b.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H2KYC5 | - | - |
| ajm-1-211 | C25A11.4a.4 | 5013 | 1480aa | C25A11.4a.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A1C3NSL9 | - | APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4, |
| - | C25A11.4k.1 | 4935 | 1644aa | C25A11.4k.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A1C3NSL9 | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| - | C25A11.4l.1 | 4710 | 1569aa | C25A11.4l.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A1C3NSL9 | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ajm-1-210 | C25A11.4m.1 | 4578 | 1525aa | C25A11.4m.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A1C3NSL9 | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ajm-1-212 | C25A11.4g.1 | 4464 | 1487aa | C25A11.4g.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A1C3NSL9 | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ajm-1-213 | C25A11.4h.1 | 4148 | 1379aa | C25A11.4h.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A1C3NSL9 | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ajm-1-214 | C25A11.4i.1 | 3903 | 1300aa | C25A11.4i.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A1C3NSL9 | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ajm-1-215 | C25A11.4j.1 | 3831 | 1276aa | C25A11.4j.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A1C3NSL9 | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| ajm-1-216 | C25A11.4e.1 | 3534 | 1177aa | C25A11.4e.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A1C3NSL9 | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
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