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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Metazoan Compara
- Genomic alignments
- Gene tree (Metazoa)
- Gene tree (Protostomes)
- Gene tree (Insects)
- Gene gain/loss tree
- Orthologues
- Paralogues
Pan-taxonomic Compara
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- Structural variants
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DB built by WormBase

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Gene: haf-4 WBGene00001814

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Description

HAlF transporter (PGP related) [Source:NCBI gene;Acc:171639]

Location

Chromosome I: 489,969-496,158 forward strand.

WBcel235:BX284601.5

About this gene

This gene has 2 transcripts (splice variants), 107 orthologues and 20 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	W04C9.1a.1	2537	787aa	W04C9.1a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9TZD9	-	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
-	W04C9.1b.1	2166	721aa	W04C9.1b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	V6CLE7	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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