Summary
- Splice variants
- Transcript comparison
- Gene alleles
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Metazoan Compara
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- GO: Biological process
- GO: Molecular function
- GO: Cellular component
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Gene: ifb-2 WBGene00002054

Description

Intermediate filament protein ifb-2 [Source:NCBI gene;Acc:173973]

Location

Chromosome II: 5,750,188-5,754,140 forward strand.

WBcel235:BX284602.5

About this gene

This gene has 3 transcripts (splice variants), 23 orthologues and 11 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	F10C1.7a.1	1804	543aa	F10C1.7a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q19286	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
-	F10C1.7c.1	1755	526aa	F10C1.7c.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q19286	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
-	F10C1.7e.1	1734	577aa	F10C1.7e.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M1Z854	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Gene: ifb-2 WBGene00002054

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Gene: ifb-2 WBGene00002054

Summary

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