UBC core domain-containing protein; UBIQUITIN_CONJUGAT_2 domain-containing protein [Source:NCBI gene;Acc:173637]
Chromosome II: 2,901,401-2,913,605 reverse strand.
WBcel235:BX284602.5
This gene has 9 transcripts (splice variants), 75 orthologues and 17 paralogues.
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | UniProt | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|
| - | Y110A2AR.2d.1 | 2215 | 540aa | Y110A2AR.2d.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A1T5HUK6 | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| - | Y110A2AR.2f.1 | 2098 | 551aa | Y110A2AR.2f.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A1T5HUK0 | - | APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4, |
| - | Y110A2AR.2i.1 | 1458 | 362aa | Y110A2AR.2i.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A1T5HUL7 | - | - |
| - | Y110A2AR.2b.1 | 1282 | 228aa | Y110A2AR.2b.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A1T5HUI8 | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| - | Y110A2AR.2e.1 | 1162 | 239aa | Y110A2AR.2e.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A1T5HUL4 | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| - | Y110A2AR.2c.1 | 1050 | 349aa | Y110A2AR.2c.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A1T5HUK4 | - | - |
| - | Y110A2AR.2a.1 | 742 | 218aa | Y110A2AR.2a.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q9N490 | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| - | Y110A2AR.2h.1 | 153 | 50aa | Y110A2AR.2h.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A1T5HUL3 | - | - |
| - | Y110A2AR.2g.1 | 120 | 39aa | Y110A2AR.2g.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A1T5HUK3 | - | - |
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