X-BoX promoter element regulated [Source:NCBI gene;Acc:179361]
Chromosome V: 9,703,055-9,707,835 forward strand.
WBcel235:BX284605.5
This gene has 6 transcripts (splice variants), 71 orthologues and 4 paralogues.
Name | Transcript ID | bp | Protein | Translation ID | Biotype | UniProt | RefSeq | Flags |
---|---|---|---|---|---|---|---|---|
- | F40F9.1b.2 | 1574 | 296aa | F40F9.1b.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q8MQ55 | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
- | F40F9.1a.2 | 1252 | 296aa | F40F9.1a.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q8MQ56 | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
- | F40F9.1b.3 | 1252 | 296aa | F40F9.1b.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q8MQ55 | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
- | F40F9.1b.1 | 1220 | 296aa | F40F9.1b.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q8MQ55 | - | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
- | F40F9.1a.1 | 1189 | 296aa | F40F9.1a.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q8MQ56 | - | APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, |
- | F40F9.1c | 1331 | No protein | - | A non-coding gene.ncRNA | - | - | - |