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Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
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Literature
Metazoan Compara
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- Paralogues
Pan-taxonomic Compara
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- Orthologues
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- GO: Cellular component
- GO: Molecular function
- GO: Biological process
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DB built by WormBase

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Gene: R13H4.2 WBGene00014826

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Description

Uncharacterized protein [Source:NCBI gene;Acc:6418761]

Location

Chromosome V: 11,836,391-11,838,020 forward strand.

WBcel235:BX284605.5

About this gene

This gene has 5 transcripts (splice variants), 1 orthologue and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
-	R13H4.2a.1	806	225aa	R13H4.2a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A5Z2W3	-	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
-	R13H4.2c.1	775	221aa	R13H4.2c.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H9G321	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
-	R13H4.2e.1	579	192aa	R13H4.2e.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	K8ESK7	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
-	R13H4.2b	774	No protein	-	A non-coding gene.ncRNA	-	-	-
-	R13H4.2d	729	No protein	-	A non-coding gene.ncRNA	-	-	-

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Summary

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